$AFS_DIR is not defined is user env
When you manually run install.sh
located in the AFS, it breaks all config symlinks.
The problem is that $AFS_DIR
is not defined in user env, so the link goes to /.config/$folder
instead of /home/firstname.lastname/afs/.config/$folder
Temp solution : export AFS_DIR=/home/firstname.lastname/afs
in shell or .bashrc